An interactive visualization framework for whole genome alignments using d3.js See an example visualization of seven chloroplast genomes.

The comparison of genome structures of organisms can yield interesting insights in evolutionary processes. In order to do the comparison whole genome alignments are required. However, the interpretation of whole genome alignments is difficult without proper visualization. AliTV utilizes D3.js to create interactive visualizations of whole genome alignments.

See the repository on GitHub. An article describing AliTV is published in PeerJ Computer Science. Further a poster has been presented at Eureka 2015 in Würzburg and a talk (by Sonja Hohlfeld) at the GCB 2016 in Berlin.